miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|33558488|gb|BX629249.1|BX629249 ACGTGCTGGTCATATTCGGTGGACTGACGGGCTACTCGTCTGATGACATCAACAAGTTCCTGTGGATGGTGCGCATCGGC
GGCAGTACGGACCGGGGCGCCCACATCAAGGAGATGGACTATTACGCGCCGAGCGGTGACTTCCGGATCGACAAGGAGGG
TTCGCCGGTGCTGCTCAACTGTCTGATGTACAAGATGTGCTACTACCGGTTCGGGCAGGTCTACACCGAGGGTGGCAAAG
CGCCCGGGTACGATCGGGTACGGGGTGCCGAGATCGGCAACAAGGACTTTGAGCTGGATGTGCTCGAGGAGGCGTACACG
ACCGAACACTGGCTGGTGCGAATCTACAAGGTGAAGGATCTCAGCAACCGTGGTGTCTAATTGGCTGCGTCAGCAGCTGC
AACAACAACCCTTCGCTTTATGTCGATTTGCTCGAGTCGGGTTGCGTAGTCATAGAACTCCCCCTACTTAACATTACTTC
TTCTTCTCTCTCTCTATAAACGATCGGTTTGCATCCCAGCCGTAAGTTGAATATGTTTCCCTACAAAAGCATACACCCAC
CCCACACAACACCTCATTTACGACCGCTGCCTTAAACGATGCAAACAAACAAACATACAAAACACACACACATATATATA
CAGGGGACAGTTTATTGAATTGAAGGATTCTATTTTGGTAATTGCGTATTGTAAGAATTTNCCCCTTTTTTTTGCTATGG




Most similar to sp|Q5RCE2|STT3A_PONAB

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q5RCE2|STT3A_PONAB Dolichyl-diphosphooligosaccharide--protein
           glycosyltransferase subunit STT3A OS=Pongo abelii
           GN=STT3A PE=2 SV=1
          Length = 705

 Score =  236 bits (601), Expect = 1e-61
 Identities = 109/125 (87%), Positives = 116/125 (92%)
 Frame = +3

Query: 3   VLVIFGGLTGYSSDDINKFLWMVRIGGSTDRGAHIKEMDYYAPSGDFRIDKEGSPVLLNC 182
           VLVIFGGLTGYSSDDINKFLWMVRIGGSTD G HIKE DYY P+G+FR+D+EGSPVLLNC
Sbjct: 578 VLVIFGGLTGYSSDDINKFLWMVRIGGSTDTGKHIKENDYYTPTGEFRVDREGSPVLLNC 637

Query: 183 LMYKMCYYRFGQVYTEGGKAPGYDRVRGAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDL 362
           LMYKMCYYRFGQVYTE  + PG+DRVR AEIGNKDFELDVLEEAYTTEHWLVRIYKVKDL
Sbjct: 638 LMYKMCYYRFGQVYTEAKRPPGFDRVRNAEIGNKDFELDVLEEAYTTEHWLVRIYKVKDL 697

Query: 363 SNRGV 377
            NRG+
Sbjct: 698 DNRGL 702